Handel mit binare optionen bei 5 minuten template
The complete description of the file format and possible parameters held within are here for reference purposes. The file consists of sections and parameters. A section begins with the name of the section in square brackets and continues until the next section begins.
Sections contain parameters of the form:. The file is line-based - that is, handel mit binare optionen bei 5 minuten template newline-terminated line represents either a comment, a section name or a parameter. Only the first equals sign in a parameter is significant.
Whitespace before or after the first equals sign is discarded. Leading, trailing and internal whitespace in section and parameter names is irrelevant. Leading and trailing whitespace in a parameter value is discarded. Internal whitespace within a parameter value is retained verbatim. Case is not significant in boolean values, but is preserved in string values. Some items such as create masks are numeric. The section name is the name of the shared resource and the parameters within the section define the shares attributes.
There are three special sections, [global], [homes] and [printers], which are described under special sections. The following notes apply to ordinary section descriptions.
A share consists of a directory to which access is being given plus a description of the access rights which are granted to the user of the service. Some housekeeping options are also specifiable.
Sections are either file share services used by the client as an extension of their native file systems or printable services used by the client to access print services on the host running the server.
Sections may be designated guest services, in which case no password is required to access them. A specified UNIX guest account is used to define access privileges in this case. Sections other than guest services will require a password to access them. The client provides the username. The access rights granted by the server are masked by the access rights granted to the specified or guest UNIX user by the host system.
The server does not grant more access than the host system grants. The following sample section defines a file space share. The share is accessed via the share name foo:.
The following sample section defines a printable share. The share is read-only, but printable. That is, the only write access permitted is via calls to open, write to and handel mit binare optionen bei 5 minuten template a spool file. The guest ok parameter means access will be permitted as the default guest user specified elsewhere:.
Parameters in this section apply to the server as a whole, or are defaults for handel mit binare optionen bei 5 minuten template that do not specifically define certain items. If a section called [homes] is included in the configuration file, services connecting clients handel mit binare optionen bei 5 minuten template their home directories can be created on the fly by the server.
When the connection request is made, the existing sections are scanned. If a match is found, it is used. If no handel mit binare optionen bei 5 minuten template is found, the requested section name is treated as a username and looked up in the local password file. If the name exists and the correct password has been given, a share is created by cloning the [homes] section.
This is a fast and simple way to give a large number of clients access to their home directories with a minimum of fuss. This method of using the [homes] section handel mit binare optionen bei 5 minuten template well if different users share a client PC. The [homes] section can specify all the parameters a normal service section can specify, though some make more sense than others. The following is a typical and suitable [homes] section:.
An important point is that if guest access is specified in the [homes] section, all home directories will be visible to all clients without a password. In the very unlikely event that this is actually desirable, it is wise to also specify read only access. The browseable flag handel mit binare optionen bei 5 minuten template auto home directories will be inherited from the global browseable flag, not the [homes] browseable flag.
If a [printers] section occurs in the configuration file, users are able to connect to any printer specified in the local host's printcap file. When a connection request is made, the existing sections are scanned.
If no match is found, but a [homes] section exists, it is used as described above. Otherwise, the requested section name is treated as a printer name and the appropriate printcap file is scanned to see if the requested section name is a valid printer share name. If a match is found, a new printer share is created by handel mit binare optionen bei 5 minuten template the [printers] section. If the share does not permit guest access and no username was given, the username is set to the located printer name.
The [printers] service Binare optionen ladder be printable - if you specify otherwise, the server will refuse to load the configuration file.
Typically the path specified is that of a world-writeable spool directory with the sticky bit set on it. A typical [printers] entry looks like this:. All aliases given for a printer in the printcap file are legitimate printer names as far as the server is concerned.
If your printing subsystem doesn't work like that, you will have to set up a pseudo-printcap. This is a file consisting of one or more lines like this:. Each alias should be an acceptable printer name for your printing subsystem. In the [global] section, specify the new file as your printcap.
The server will only recognize names found in your pseudo-printcap, which of course can contain whatever aliases you like.
The same technique could be used simply to limit access to a subset of your local printers. An alias, by the way, is defined as any component of the first entry of a printcap record. Records are separated by newlines, components if there are more than one are separated by vertical bar symbols.
See the printcap name option for more details. Starting with Samba version 3. This capability is called usershares and is controlled by a set of parameters in the [global] section of the smb. The relevant parameters are:. Points to the directory containing the user defined share definitions.
The filesystem permissions on handel mit binare optionen bei 5 minuten template directory control handel mit binare optionen bei 5 minuten template can create user defined shares.
Comma-separated list of absolute pathnames restricting what directories can be shared. Only directories below the pathnames in this list are permitted. Directories below the pathnames in this list are prohibited. Names a pre-existing share used as a template for creating new usershares. All other share parameters not specified in the user defined share definition are copied from this named share.
To allow members of the UNIX group foo to create user defined shares, create the directory to contain the share definitions as follows:. Members of the group foo may then manipulate the user defined shares using the following commands. Some parameters are specific to the [global] section e. Some parameters are usable in all sections e. All others are permissible only in normal sections.
For the purposes of the following descriptions the [homes] and [printers] sections will be considered normal. The letter G in parentheses indicates that a parameter is specific to the [global] section. The letter S indicates that a parameter can be specified in a service specific section. All S parameters can also be specified in the [global] section - in which case they will define the default behavior for all services.
Parameters are arranged here in alphabetical order - this may not create best bedfellows, but at least you can find them! Where there are synonyms, the preferred synonym is described, others refer to the preferred synonym. Many of the strings that are settable in the config file can take substitutions. These substitutions are mostly noted in the descriptions below, but there are some general substitutions which apply whenever they might be relevant.
This parameter is not available when Samba listens on portas clients no longer send this information. This will cause Samba to not listen on port and will permit include functionality to function as it did with Samba 2. This allows you to change your config based on what the client calls you. The architecture of the remote machine. The following substitutes apply only to some configuration options only those that are used when a connection has been established:.
This is obtained from your NIS auto. There are some quite creative things that can be done with these substitutions and other smb. Samba supports name mangling so that DOS and Windows clients can use files that don't conform to the 8. It can also be set to adjust the case of 8. There are several options that control the way mangling is performed, and they are grouped here rather than listed separately.
For the defaults look at the output of the testparm program. If they aren't, Samba must do a filename search and match on passed names. No Windows or DOS system supports case-sensitive filename so setting this option to auto is that same as setting it to no for them. As part of the optimizations for directories containing large numbers of files, the following special case applies.
BCFtools is designed to work on a stream. It regards an input file "-" as the standard input stdin and outputs to the standard output stdout.
Several handel mit binare optionen bei 5 minuten template can thus be combined with Unix pipes. This manual page was last updated and refers to bcftools git version 1. See bcftools call for variant calling from the output of the samtools mpileup command. The handel mit binare optionen bei 5 minuten template calling model is recommended for most tasks.
For a full list of available commands, run bcftools without arguments. Handel mit binare optionen bei 5 minuten template following options are common to many bcftools commands. See usage for specific commands to see if they apply. Controls how to treat records with duplicate positions and defines compatible records across multiple input files. Here by "compatible" we mean records which should be considered as identical by the tools.
This command replaces the former bcftools view caller. Some of the original functionality has been temporarily lost in the process of transition under htslibbut will be added back on popular demand. The original calling model can be invoked with the -c option.
All source files must have the same sample columns appearing in the same order. The input files must be sorted by chr and position. The files must be given in the correct order to produce sorted VCF on output unless the -a, --allow-overlaps option is specified. Checks sample identity or, without -gmulti-sample cross-check is performed.
CSI coordinate-sorted index is created by default. Creates intersections, unions and complements of VCF files. Depending on the options, the program can output records from one or more files which have or do not have corresponding records with the same position in the other files.
For example, when merging file A. Note that it is responsibility of the user to ensure that the sample names are unique across all files.
If they are not, the program will exit with an error unless the option --force-samples is given. The sample names can be also given explicitly using the --print-header and --use-header options. Note that only records from different files can be merged, never from the same file. For "vertical" merge take a look at bcftools norm instead.
Left-align and normalize indels, check if REF alleles match the reference, split multiallelic sites into multiple rows; recover multiallelics from multiple rows. Things to check if your plugin does not show up in the bcftools plugin -l output:. Parses VCF or BCF and produces text file stats which is suitable for machine processing and can be plotted using plot-vcfstats.
When two files are given, the program generates separate stats for intersection and the complements. If handel mit binare optionen bei 5 minuten template present, the default is to print to standard output stdout.
These filtering expressions are accepted by annotatefilterquery and view commands. Note that expressions must often be quoted because some characters have special meaning in the shell.
An example of expression enclosed in single quotes which cause that the whole expression is passed to the program as intended:. Script for processing output of bcftools stats. It can merge results from multiple outputs useful when running the stats for each chromosome separatelyplots graphs and creates a PDF presentation. Simple operations, like handel mit binare optionen bei 5 minuten template a single column from a VCF file, can be therefore done much faster with standard UNIX commands, such as awk or cut.
Please report any bugs you encounter on the github website: Heng Li from the Sanger Institute wrote the original C version of htslib, samtools and bcftools. Many other people contributed to the program and to the file format specifications, both directly and indirectly by providing patches, testing and reporting bugs. We thank them all. Copyright c Genome Research Ltd. The file "-" is interpreted as standard input. Some tools may require tabix- or CSI-indexed files.
In the case of records with the same position, only the first will be considered and appear on output. For duplicate positions, only the first SNP record will be considered and appear on output.
For duplicate positions, handel mit binare optionen bei 5 minuten template the first indel record will be considered and appear on output. Supported by bcftools merge only. BED files are expected to have the ". When multiple ALT alleles are present in the annotation file given as comma-separated list of allelesat least one must match one of the alleles in the corresponding VCF record.
Similarly, at least one alternate allele from a multi-allelic VCF record must be present in the annotation file. See also -c, --columns and -h, --header-lines. Unused columns which should be ignored can be indicated by "-". By default, existing values are replaced.
To replace only existing values without modifying missing annotations, use "-TAG". The format is the same as in the query command see below.
By default all existing IDs are replaced. For example, one can use. Currently GQ and GP fields are supported. For convenience, the fields can be given as lower case letters. The parameter INT is the minimum per-sample depth required to include a site in the non-variant block. See also -T, --targets-file. See also -s, --samples and -n, --novel-rate. See discussion of --regions-file in Common Options for file format details. See also -g below. Note that the first column of the haps file is expected to be in the form "CHR: For example, the program will print 0 0 handel mit binare optionen bei 5 minuten template of the default 0.
This is useful for programs which do not handle haploid genotypes correctly. The input file fields can be tab- or space- delimited -c, --columns list comma-separated list of fields in the input file. The AA field lists alleles on the forward reference strand, for example "CC" or "CT" for diploid genotypes or "C" for haploid genotypes sex chromosomes. Insertions and deletions are not supported yet, missing data can be indicated with "--".
The following example demonstrates the logic of --SnpGap 3 applied on a deletion and an insertion: The following example demonstrates the logic of --IndelGap 2 applied on a deletion and an insertion: The "x" mode resets filters handel mit binare optionen bei 5 minuten template sites which pass to "PASS". When set to 1, reported discordance is the number of non-matching GTs, otherwise the number INT is interpreted as phred-scaled likelihood of unobserved genotypes. This may be useful with low coverage data.
By default, the first sample is checked. CN, Discordance Pairwise discordance for all sample pairs is calculated as. When PL field is not present, a constant value 99 is used for the unseen genotypes. With -Gthe value 1 can be used instead; the discordance value then gives exactly the number of differing genotypes. SM, Average Discordance Average discordance between sample a and all other samples.
SM, Average Number of sites The average number of sites used to calculate the discordance. Output format is three tab-delimited columns listing the contig name, contig length.
Contigs with zero records are not printed. If -e or -i appears only once, the same filtering expression will be applied to all input files. Otherwise, -e or -i must be given for each input file. See discussion of -e, --exclude above.
When several files are being output, their names are controlled via -p instead. With -p and no -wall files are written. Duplicate sample names will be resolved by prepending index of the file as it appeared on the command line to the conflicting sample name see 2: S3 in the above example. An optional type string can follow which controls variant types which should be split or merged together: If only SNP records should be split or merged, specify snps ; if both SNPs and indels should be merged separately into two records, specify both ; if SNPs and indels should be merged into a single record, specify any.
List of plugins coming with the distribution: List options common to all plugins bcftools plugin List available plugins bcftools plugin -l One can run plugins in several ways bcftools plugin counts in. Things to check if your plugin does not show up in the bcftools plugin -l output: Run with the -v option for verbose output: Are all shared libraries, namely libhts.